encode-toolkit MCP Server
ammawla/encode-toolkit
[](https://agentrank-ai.com/tool/ammawla--encode-toolkit/?utm_source=badge&utm_medium=readme&utm_campaign=agentrank_badge) MCP server and Claude Code plugin for the ENCODE Project: search, download and analyze ChIP-seq, ATAC-seq, RNA-seq, WGBS, Hi-C and CUT&RUN data with 20 tools, 47 skills and 7 Nextflow pipelines
claude mcp add agentrank -- npx -y agentrank-mcp-server Overview
ammawla/encode-toolkit is a Python MCP server licensed under AGPL-3.0. MCP server and Claude Code plugin for the ENCODE Project: search, download and analyze ChIP-seq, ATAC-seq, RNA-seq, WGBS, Hi-C and CUT&RUN data with 20 tools, 47 skills and 7 Nextflow pipelines
Ranked #22867 out of 24846 indexed tools.
Ecosystem
Score Breakdown
21 stars → early stage
Last commit 1mo ago → moderate activity
0/2 issues closed → many open issues
2 contributors → solo project
No dependents → no downstream usage
Weights: Freshness 20% · Issue Health 20% · Dependents 22% · Stars 10% · Contributors 8% · How we score →
How to Improve
Matched Queries
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