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biomcp MCP Server

genomoncology/biomcp

Score: 91.5 ↑ 0.6% Rank #253 MCP Server
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BioMCP: Biomedical Model Context Protocol

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Overview

genomoncology/biomcp is a Rust MCP server licensed under MIT. BioMCP: Biomedical Model Context Protocol Topics: ai, bioinformatics, clinical-trials, genomics, llm, mcp, mcp-server, medical, model-context-protocol, pubmed, pubmed-central.

Ranked #253 out of 24846 indexed tools.

In the top 2% of all indexed tools.

Has 10 contributors.

Actively maintained with commits in the last week.

Ecosystem

Rust MIT
aibioinformaticsclinical-trialsgenomicsllmmcpmcp-servermedicalmodel-context-protocolpubmedpubmed-central

Score Breakdown

StarsFreshnessIssue HealthContributorsDependents
Stars 15% 654

654 stars → growing community

Freshness 25% 4d ago

Last commit 4d ago → actively maintained

Issue Health 25% 98%

46/47 issues closed → responsive maintainer

Contributors 10% 10

10 contributors → active community

Dependents 25% 0

No dependents → no downstream usage

npm Downloads N/A
PyPI Downloads N/A
Forks 117
Description Brief
License MIT

Weights: Freshness 20% · Issue Health 20% · Dependents 22% · Stars 10% · Contributors 8% · How we score →

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AgentRank score for genomoncology/biomcp
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Matched Queries

"model context protocol""model-context-protocol"topic:mcptopic:mcp-servertopic:model-context-protocol

From the README

# BioMCP

One binary. One grammar. Evidence from the biomedical sources you already trust.

## What is BioMCP?

BioMCP is one CLI binary over a single command grammar that reaches ~30 trusted
biomedical sources (PubMed, ClinVar, ClinicalTrials.gov, OncoKB, Reactome, and
more). It is also an MCP (Model Context Protocol) server, so the same tools are
available to AI agents such as Claude Code, Codex, and Claude Desktop.

BioMCP cuts through the usual biomedical data maze: one query reaches the
sources that normally live behind different APIs, identifiers, and search
habits. Researchers, clinicians, and agents use the same command grammar to
search, focus, and pivot without rebuilding the workflow for each source. You
get compact, evidence-oriented results across live public data plus local study analytics.

## Features

- **Search the literature:** `search article` fans out across PubTator3 and
  Europe PMC, deduplicates PMID/PMCID/DOI identifiers, and can add a Semantic
  Scholar leg wh
Read full README on GitHub →

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